moved two more dump()s to closure, saving 2/3rd of memory and some CPU time on
[webpac2] / run.pl
1 #!/usr/bin/perl -w
2
3 use strict;
4
5 use Cwd qw/abs_path/;
6 use File::Temp qw/tempdir/;
7 use lib './lib';
8
9 use WebPAC::Common 0.02;
10 use WebPAC::Parser 0.08;
11 use WebPAC::Input 0.14;
12 use WebPAC::Store 0.14;
13 use WebPAC::Normalize 0.22;
14 use WebPAC::Output::TT;
15 use WebPAC::Validate 0.06;
16 use WebPAC::Output::MARC;
17 use WebPAC::Config;
18 use Getopt::Long;
19 use File::Path;
20 use Time::HiRes qw/time/;
21 use File::Slurp;
22 use Data::Dump qw/dump/;
23 use Storable qw/dclone/;
24
25 use Proc::Queue size => 1;
26 use POSIX ":sys_wait_h"; # imports WNOHANG
27
28 =head1 NAME
29
30 run.pl - start WebPAC indexing
31
32 B<this command will probably go away. Don't get used to it!>
33
34 Options:
35
36 =over 4
37
38 =item --offset 42
39
40 start loading (all) databases at offset 42
41
42 =item --limit 100
43
44 limit loading to 100 records
45
46 =item --clean
47
48 remove database and Hyper Estraier index before indexing
49
50 =item --only=database_name/input_filter
51
52 reindex just single database (legacy name is --one)
53
54 C</input_filter> is optional part which can be C<name>
55 or C<type> from input
56
57 =item --config conf/config.yml
58
59 path to YAML configuration file
60
61 =item --stats
62
63 disable indexing, modify_* in configuration and dump statistics about field
64 and subfield usage for each input
65
66 =item --validate path/to/validation_file
67
68 turn on extra validation of imput records, see L<WebPAC::Validation>
69
70 =item --marc-lint
71
72 By default turned on if normalisation file has C<marc*> directives. You can disable lint
73 messages with C<--no-marc-lint>.
74
75 =item --marc-dump
76
77 Force dump or input and marc record for debugging.
78
79 =item --parallel 4
80
81 Run databases in parallel (aproximatly same as number of processors in
82 machine if you want to use full load)
83
84 =item --only-links
85
86 Create just links
87
88 =item --merge
89
90 Create merged index of databases which have links
91
92 =back
93
94 =cut
95
96 my $offset;
97 my $limit;
98
99 my $clean = 0;
100 my $config_path;
101 my $debug = 0;
102 my $only_filter;
103 my $stats = 0;
104 my $validate_path;
105 my $marc_lint = 1;
106 my $marc_dump = 0;
107 my $parallel = 0;
108 my $only_links = 0;
109 my $merge = 0;
110
111 my $log = _new WebPAC::Common()->_get_logger();
112
113 GetOptions(
114         "limit=i" => \$limit,
115         "offset=i" => \$offset,
116         "clean" => \$clean,
117         "one=s" => \$only_filter,
118         "only=s" => \$only_filter,
119         "config" => \$config_path,
120         "debug+" => \$debug,
121         "stats" => \$stats,
122         "validate=s" => \$validate_path,
123         "marc-lint!" => \$marc_lint,
124         "marc-dump!" => \$marc_dump,
125         "parallel=i" => \$parallel,
126         "only-links!" => \$only_links,
127         "merge" => \$merge,
128 );
129
130 my $config = new WebPAC::Config( path => $config_path );
131
132 #print "config = ",dump($config) if ($debug);
133
134 die "no databases in config file!\n" unless ($config->databases);
135
136 $log->info( "-" x 79 );
137
138
139 my $estcmd_fh;
140 my $estcmd_path = './estcmd-merge.sh';
141 if ($merge) {
142         open($estcmd_fh, '>', $estcmd_path) || $log->logdie("can't open $estcmd_path: $!");
143         print $estcmd_fh 'cd /data/estraier/_node/ || exit 1',$/;
144         print $estcmd_fh 'sudo /etc/init.d/hyperestraier stop',$/;
145         $log->info("created merge batch file $estcmd_path");
146 }
147
148
149 my $validate;
150 $validate = new WebPAC::Validate(
151         path => $validate_path,
152 ) if ($validate_path);
153
154
155 my $use_indexer = $config->use_indexer;
156 if ($stats) {
157         $log->debug("option --stats disables update of indexing engine...");
158         $use_indexer = undef;
159 } else {
160         $log->info("using $use_indexer indexing engine...");
161 }
162
163 # parse normalize files and create source files for lookup and normalization
164
165 my $parser = new WebPAC::Parser( config => $config );
166
167 my $total_rows = 0;
168 my $start_t = time();
169
170 my @links;
171
172 if ($parallel) {
173         $log->info("Using $parallel processes for speedup");
174         Proc::Queue::size($parallel);
175 }
176
177 sub create_ds_config {
178         my ($db_config, $database, $input, $mfn) = @_;
179         my $c = dclone( $db_config );
180         $c->{_} = $database || $log->logconfess("need database");
181         $c->{_mfn} = $mfn || $log->logconfess("need mfn");
182         $c->{input} = $input || $log->logconfess("need input");
183         return $c;
184 }
185
186 while (my ($database, $db_config) = each %{ $config->databases }) {
187
188         my ($only_database,$only_input) = split(m#/#, $only_filter) if ($only_filter);
189         next if ($only_database && $database !~ m/$only_database/i);
190
191         if ($parallel) {
192                 my $f=fork;
193                 if(defined ($f) and $f==0) {
194                         $log->info("Created processes $$ for speedup");
195                 } else {
196                         next;
197                 }
198         }
199
200         my $indexer;
201         if ($use_indexer && $parser->have_rules( 'search', $database )) {
202
203                 my $cfg_name = $use_indexer;
204                 $cfg_name =~ s/\-.*$//;
205
206                 my $indexer_config = $config->get( $cfg_name ) || $log->logdie("can't find '$cfg_name' part in confguration");
207                 $indexer_config->{database} = $database;
208                 $indexer_config->{clean} = $clean;
209                 $indexer_config->{label} = $db_config->{name};
210
211                 # force clean if database has links
212                 $indexer_config->{clean} = 1 if ($db_config->{links});
213
214                 if ($use_indexer eq 'hyperestraier') {
215
216                         # open Hyper Estraier database
217                         use WebPAC::Output::Estraier '0.10';
218                         $indexer = new WebPAC::Output::Estraier( %{ $indexer_config } );
219                 
220                 } elsif ($use_indexer eq 'hyperestraier-native') {
221
222                         # open Hyper Estraier database
223                         use WebPAC::Output::EstraierNative;
224                         $indexer = new WebPAC::Output::EstraierNative( %{ $indexer_config } );
225
226                 } elsif ($use_indexer eq 'kinosearch') {
227
228                         # open KinoSearch
229                         use WebPAC::Output::KinoSearch;
230                         $indexer_config->{clean} = 1 unless (-e $indexer_config->{index_path});
231                         $indexer = new WebPAC::Output::KinoSearch( %{ $indexer_config } );
232
233                 } else {
234                         $log->logdie("unknown use_indexer: $use_indexer");
235                 }
236
237                 $log->logide("can't continue without valid indexer") unless ($indexer);
238         }
239
240
241         #
242         # store Hyper Estraier links to other databases
243         #
244         if (ref($db_config->{links}) eq 'ARRAY' && $use_indexer) {
245                 foreach my $link (@{ $db_config->{links} }) {
246                         if ($use_indexer eq 'hyperestraier') {
247                                 if ($merge) {
248                                         print $estcmd_fh 'sudo -u www-data estcmd merge ' . $database . ' ' . $link->{to},$/;
249                                 } else {
250                                         $log->info("saving link $database -> $link->{to} [$link->{credit}]");
251                                         push @links, sub {
252                                                 $log->info("adding link $database -> $link->{to} [$link->{credit}]");
253                                                 $indexer->add_link(
254                                                         from => $database,
255                                                         to => $link->{to},
256                                                         credit => $link->{credit},
257                                                 );
258                                         };
259                                 }
260                         } else {
261                                 $log->warn("NOT IMPLEMENTED WITH $use_indexer: adding link $database -> $link->{to} [$link->{credit}]");
262                         }
263                 }
264         }
265         next if ($only_links);
266
267
268         #
269         # now WebPAC::Store
270         #
271         my $abs_path = abs_path($0);
272         $abs_path =~ s#/[^/]*$#/#;
273
274         my $db_path = $config->webpac('db_path');
275
276         if ($clean) {
277                 $log->info("creating new database '$database' in $db_path");
278                 rmtree( $db_path ) || $log->warn("can't remove $db_path: $!");
279         } else {
280                 $log->info("working on database '$database' in $db_path");
281         }
282
283         my $store = new WebPAC::Store(
284                 path => $db_path,
285                 debug => $debug,
286         );
287
288
289         #
290         # now, iterate through input formats
291         #
292
293         my @inputs;
294         if (ref($db_config->{input}) eq 'ARRAY') {
295                 @inputs = @{ $db_config->{input} };
296         } elsif ($db_config->{input}) {
297                 push @inputs, $db_config->{input};
298         } else {
299                 $log->info("database $database doesn't have inputs defined");
300         }
301
302         foreach my $input (@inputs) {
303
304                 my $input_name = $input->{name} || $log->logdie("input without a name isn't valid: ",dump($input));
305
306                 next if ($only_input && ($input_name !~ m#$only_input#i && $input->{type} !~ m#$only_input#i));
307
308                 my $type = lc($input->{type});
309
310                 die "I know only how to handle input types ", join(",", $config->webpac('inputs') ), " not '$type'!\n" unless (grep(/$type/, $config->webpac('inputs')));
311
312                 my $input_module = $config->webpac('inputs')->{$type};
313
314                 my @lookups = $parser->have_lookup_create($database, $input);
315
316                 $log->info("working on input '$input_name' in $input->{path} [type: $input->{type}] using $input_module",
317                         @lookups ? " creating lookups: ".join(", ", @lookups) : ""
318                 );
319
320                 if ($stats) {
321                         # disable modification of records if --stats is in use
322                         delete($input->{modify_records});
323                         delete($input->{modify_file});
324                 }
325
326                 my $input_db = new WebPAC::Input(
327                         module => $input_module,
328                         encoding => $config->webpac('webpac_encoding'),
329                         limit => $limit || $input->{limit},
330                         offset => $offset,
331                         recode => $input->{recode},
332                         stats => $stats,
333                         modify_records => $input->{modify_records},
334                         modify_file => $input->{modify_file},
335                 );
336                 $log->logdie("can't create input using $input_module") unless ($input);
337
338                 if (defined( $input->{lookup} )) {
339                         $log->warn("$database/$input_name has depriciated lookup definition, removing it...");
340                         delete( $input->{lookup} );
341                 }
342
343                 my $lookup_coderef;
344
345                 if (@lookups) {
346
347                         my $rules = $parser->lookup_create_rules($database, $input) || $log->logdie("no rules found for $database/$input");
348
349                         $lookup_coderef = sub {
350                                 my $rec = shift || die "need rec!";
351                                 my $mfn = $rec->{'000'}->[0] || die "need mfn in 000";
352
353                                 WebPAC::Normalize::data_structure(
354                                         row => $rec,
355                                         rules => $rules,
356                                         config => create_ds_config( $db_config, $database, $input, $mfn ),
357                                 );
358
359                                 #warn "current lookup: ", dump(WebPAC::Normalize::_get_lookup());
360                         };
361
362                         WebPAC::Normalize::_set_lookup( undef );
363
364                         $log->debug("created lookup_coderef using:\n$rules");
365
366                 };
367
368                 my $lookup_jar;
369
370                 my $maxmfn = $input_db->open(
371                         path => $input->{path},
372                         code_page => $input->{encoding},        # database encoding
373                         lookup_coderef => $lookup_coderef,
374                         lookup => $lookup_jar,
375                         %{ $input },
376                         load_row => sub {
377                                 my $a = shift;
378                                 return $store->load_row(
379                                         database => $database,
380                                         input => $input_name,
381                                         id => $a->{id},
382                                 );
383                         },
384                         save_row => sub {
385                                 my $a = shift;
386                                 return $store->save_row(
387                                         database => $database,
388                                         input => $input_name,
389                                         id => $a->{id},
390                                         row => $a->{row},
391                                 );
392                         },
393
394                 );
395
396                 my $lookup_data = WebPAC::Normalize::_get_lookup();
397
398                 if (defined( $lookup_data->{$database}->{$input_name} )) {
399                         $log->debug("created following lookups: ", sub { dump( $lookup_data ) } );
400
401                         foreach my $key (keys %{ $lookup_data->{$database}->{$input_name} }) {
402                                 $store->save_lookup(
403                                         database => $database,
404                                         input => $input_name,
405                                         key => $key,
406                                         data => $lookup_data->{$database}->{$input_name}->{$key},
407                                 );
408                         }
409                 }
410
411                 my $report_fh;
412                 if ($stats || $validate) {
413                         my $path = "out/report/${database}-${input_name}.txt";
414                         open($report_fh, '>', $path) || $log->logdie("can't open $path: $!");
415
416                         print $report_fh "Report for database '$database' input '$input_name' records ",
417                                 $offset || 1, "-", $limit || $input->{limit} || $maxmfn, "\n\n";
418                         $log->info("Generating report file $path");
419                 }
420
421                 my $marc;
422                 if ($parser->have_rules( 'marc', $database, $input_name )) {
423                         $marc = new WebPAC::Output::MARC(
424                                 path => "out/marc/${database}-${input_name}.marc",
425                                 lint => $marc_lint,
426                                 dump => $marc_dump,
427                         );
428                 }
429
430                 my $rules = $parser->normalize_rules($database,$input_name) || $log->logdie("no normalize rules found for $database/$input_name");
431                 $log->debug("parsed normalize rules:\n$rules");
432
433                 # reset position in database
434                 $input_db->seek(1);
435
436                 # generate name of config key for indexer (strip everything after -)
437                 my $indexer_config = $use_indexer;
438                 $indexer_config =~ s/^(\w+)-?.*$/$1/g if ($indexer_config);
439
440                 my $lookup_hash;
441                 my $depends = $parser->depends($database,$input_name);
442         
443                 if ($depends) {
444                         $log->debug("$database/$input_name depends on: ", dump($depends)) if ($depends);
445                         $log->logdie("parser->depends didn't return HASH") unless (ref($depends) eq 'HASH');
446
447                         foreach my $db (keys %$depends) {
448                                 foreach my $i (keys %{$depends->{$db}}) {
449                                         foreach my $k (keys %{$depends->{$db}->{$i}}) {
450                                                 my $t = time();
451                                                 $log->debug("loading lookup $db/$i");
452                                                 $lookup_hash->{$db}->{$i}->{$k} = $store->load_lookup(
453                                                         database => $db,
454                                                         input => $i,
455                                                         key => $k,
456                                                 );
457                                                 $log->debug(sprintf("lookup $db/$i took %.2fs", time() - $t));
458                                         }
459                                 }
460                         }
461
462                         $log->debug("lookup_hash = ", sub { dump( $lookup_hash ) });
463                 }
464
465
466                 foreach my $pos ( 0 ... $input_db->size ) {
467
468                         my $row = $input_db->fetch || next;
469
470                         my $mfn = $row->{'000'}->[0];
471
472                         if (! $mfn || $mfn !~ m#^\d+$#) {
473                                 $log->warn("record $pos doesn't have valid MFN but '$mfn', using $pos");
474                                 $mfn = $pos;
475                                 push @{ $row->{'000'} }, $pos;
476                         }
477
478
479                         if ($validate) {
480                                 if ( my $errors = $validate->validate_errors( $row, $input_db->dump ) ) {
481                                         $log->error( "MFN $mfn validation error:\n",
482                                                 $validate->report_error( $errors )
483                                         );
484                                 }
485                         }
486
487                         my $ds = WebPAC::Normalize::data_structure(
488                                 row => $row,
489                                 rules => $rules,
490                                 lookup => $lookup_hash,
491                                 config => create_ds_config( $db_config, $database, $input, $mfn ),
492                                 marc_encoding => 'utf-8',
493                                 load_row_coderef => sub {
494                                         my ($database,$input,$mfn) = @_;
495                                         return $store->load_row(
496                                                 database => $database,
497                                                 input => $input,
498                                                 id => $mfn,
499                                         );
500                                 },
501                         );
502
503                         $log->debug("ds = ", sub { dump($ds) }) if ($ds);
504
505                         $store->save_ds(
506                                 database => $database,
507                                 input => $input_name,
508                                 id => $mfn,
509                                 ds => $ds,
510                         ) if ($ds && !$stats);
511
512                         $indexer->add(
513                                 id => "${input_name}/${mfn}",
514                                 ds => $ds,
515                                 type => $config->get($indexer_config)->{type},
516                         ) if ($indexer && $ds);
517
518                         if ($marc) {
519                                 my $i = 0;
520
521                                 while (my $fields = WebPAC::Normalize::_get_marc_fields( fetch_next => 1 ) ) {
522                                         $marc->add(
523                                                 id => $mfn . ( $i ? "/$i" : '' ),
524                                                 fields => $fields,
525                                                 leader => WebPAC::Normalize::marc_leader(),
526                                                 row => $row,
527                                         );
528                                         $i++;
529                                 }
530
531                                 $log->info("Created $i instances of MFN $mfn\n") if ($i > 1);
532                         }
533
534                         $total_rows++;
535                 }
536
537                 if ($validate) {
538                         my $errors = $validate->report;
539                         if ($errors) {
540                                 $log->info("validation errors:\n$errors\n" );
541                                 print $report_fh "$errors\n" if ($report_fh);
542                         }
543                 }
544
545                 if ($stats) {
546                         my $s = $input_db->stats;
547                         $log->info("statistics of fields usage:\n$s");
548                         print $report_fh "Statistics of fields usage:\n$s" if ($report_fh);
549                 }
550
551                 # close MARC file
552                 $marc->finish if ($marc);
553
554                 # close report
555                 close($report_fh) if ($report_fh)
556
557         }
558
559         eval { $indexer->finish } if ($indexer && $indexer->can('finish'));
560
561         my $dt = time() - $start_t;
562         $log->info("$total_rows records ", $indexer ? "indexed " : "",
563                 sprintf("in %.2f sec [%.2f rec/sec]",
564                         $dt, ($total_rows / $dt)
565                 )
566         );
567
568
569         # end forked process
570         if ($parallel) {
571                 $log->info("parallel process $$ finished");
572                 exit(0);
573         }
574
575 }
576
577 if ($parallel) {
578         # wait all children to finish
579         sleep(1) while wait != -1;
580         $log->info("all parallel processes finished");
581 }
582
583 #
584 # handle links or merge after indexing
585 #
586
587 if ($merge) {
588         print $estcmd_fh 'sudo /etc/init.d/hyperestraier start',$/;
589         close($estcmd_fh);
590         chmod 0700, $estcmd_path || $log->warn("can't chmod 0700 $estcmd_path: $!");
591         system $estcmd_path;
592 } else {
593         foreach my $link (@links) {
594                 $log->logdie("coderef in link ", Dumper($link), " is ", ref($link), " and not CODE") unless (ref($link) eq 'CODE');
595                 $link->();
596         }
597 }