cleanup $results and $citations options
[webpac2] / bin / isi-download-results.pl
1 #!/usr/bin/perl
2
3 use warnings;
4 use strict;
5
6 use WWW::Mechanize;
7 use Data::Dump qw(dump);
8 use File::Path;
9 use Text::Unaccent;
10
11 # Advanced search syntax:
12 # http://images.isiknowledge.com/WOK46/help/WOS/h_advanced_examples.html
13
14 our $q = 'AD=Croatia';
15 my $range_size = 500;
16 my $overlap    = 3; # between previous and this range
17 my $results = 0;
18 my $citations = 0;
19 my $cites_by_year = 0;
20
21 my $max_cites = 5000; # ISI limit to get cites
22
23 if ( 0 ) {
24         $q = 'TS=psychology AND AD=Croatia';
25         $range_size = 50;
26         $overlap    = 0;
27         $max_cites  = 50;
28 }
29
30 $q = unac_string( 'utf-8', join(' ', @ARGV) ) if @ARGV;
31
32 our $mech = WWW::Mechanize->new(
33         autocheck => 0, # it dies in reference download with it!
34         cookie_jar => undef,
35 );
36
37 our $step = 0;
38 our @ranges;
39
40 my $dir = '/tmp/isi/';
41 #rmtree $dir if -e $dir;
42 mkdir $dir unless -d $dir;
43
44 sub save_mech {
45         my $path = shift;
46         $step++;
47         my $base_path = sprintf('%s/%04d', $dir,$step);
48         $path ||= $base_path;
49         $path .= $mech->{ct} =~ m{html}i ? '.html' : '.txt';
50         $mech->save_content( $path );
51         warn "# [$step] $path ", -s $path, " ", $mech->ct, "\n";
52         open(my $dump, '>', "$base_path.dump.txt");
53         $mech->dump_all($dump);
54 }
55
56 warn "# get session";
57 $mech->get( 'http://isiknowledge.com/?DestApp=WOS' );
58 save_mech;
59
60 sub search {
61         warn "# advanced serach";
62         $mech->follow_link( url_regex => qr/AdvancedSearch/ );
63         save_mech;
64
65         warn "# cookie_jar ", dump $mech->cookie_jar;
66
67         my $q_this = $q;
68
69         if ( @ranges ) {
70                 $q_this .= ' AND (' . join(' OR ', map { "PY=$_" } @{ shift @ranges } ) . ')';
71         }
72
73         warn "# submit_form search: $q_this\n";
74         $mech->submit_form(
75                 fields => {
76                         'value(input1)' => $q_this,
77                 },
78         );
79         save_mech;
80
81         warn "# summary";
82         $mech->follow_link( url_regex => qr/summary/ );
83         save_mech;
84 }
85
86 sub get_results {
87         my $desc = shift;
88         my $from = 1;
89
90         while ( 1 ) {
91
92                 my $to = $from + $range_size;
93
94                 warn "# submit_form results $from - $to\n";
95
96                 $mech->submit_form(
97                         form_name => 'summary_output_form',
98                         fields => {
99                                 record_select_type => 'range',
100                                 mark_from => $from,
101                                 mark_to => $to,
102                                 mark_id => 'WOS',
103
104                                 qo_fields => 'fullrecord',
105                                 citedref => 'citedref',
106
107                                 save_options => 'plain_text',
108
109                                 fields => 'Full',
110                                 format => 'save',
111                         },
112                         button => 'save',
113                 );
114                 save_mech;
115
116
117                 if ( $mech->content =~ m{invalid API call} ) {
118                         $mech->back;
119                         last;
120                 }
121
122
123                 my $path = "/tmp/isi.$q.$from-$to";
124                 $path .= '.' . $desc if $desc;
125
126                 warn "save $from - $to into $path\n";
127                 $mech->follow_link( url_regex => qr/save_file/ );
128                 save_mech $path;
129
130                 $from += $range_size - $overlap;
131
132                 $mech->back;
133                 $mech->back;
134                 #save_mech;
135         }
136 }
137
138
139 sub citations {
140         warn "# citation report";
141         $mech->follow_link( url_regex => qr/search_mode=CitationReport/ );
142         save_mech;
143
144         warn "view citing articles";
145         $mech->follow_link( url_regex => qr/search_mode=TotalCitingArticles/ );
146         save_mech;
147 }
148
149 sub years {
150         my $years_url = $mech->find_link( url_regex => qr/ra_name=/ );
151         if ( ! $years_url ) {
152                 warn "W: can't find ra_name link\n";
153                 return;
154         }
155         $years_url = $years_url->url_abs;
156         warn "## $years_url";
157         if ( $years_url !~ s{ra_name=\w+}{ra_name=PublicationYear} ) {
158                 warn "W: no ra_name in $years_url\n";
159                 return;
160         }
161         warn "# refine years (hidden by javascript)";
162 #       warn "http://apps.isiknowledge.com/RAMore.do?product=WOS&search_mode=TotalCitingArticles&SID=T1o6bChdN9PGP1LN1Nh&qid=3&ra_mode=more&ra_name=PublicationYear&db_id=WOS&viewType=raMore\n$years_url\n";
163         $mech->get( $years_url );
164         save_mech;
165
166         my $html = $mech->content;
167         my $years;
168         while ( $html =~ s{<label.+?PublicationYear.+?>(\d{4})\s\(([\d,]+)\)</label>}{} ) {
169                 my ( $year, $count ) = ( $1, $2 );
170                 $count =~ s{,}{}g;
171                 $years->{$year} = $count;
172         }
173         warn "# years ",dump $years;
174         $mech->back;
175
176         my @y = sort keys %$years;
177
178         @ranges = ();
179
180         if ( $cites_by_year ) {
181                 push @ranges, [ $_ ] foreach @y;
182                 warn "# cites_by_year ranges ", dump @ranges;
183                 return;
184         }
185
186         my $y = shift @y;
187         my $size = $years->{$y};
188
189         my $cites_range;
190         $cites_range = [$y] if $y;
191
192         foreach my $y ( @y ) {
193                 if ( $size + $years->{$y} > $max_cites ) {
194                         push @ranges, $cites_range;
195                         warn "# cites_range $size years ",dump( $cites_range ),$/;
196
197                         $cites_range = [];
198                         $size = 0;
199                 }
200                 $size += $years->{$y};
201                 push @$cites_range, $y;
202         }
203
204         if ( $cites_range ) {
205                 push @ranges, $cites_range;
206                 warn "# cites_range $size years ",dump( $cites_range ), " FINAL\n"
207         }
208
209         warn '# ranges ', dump @ranges;
210         @ranges = () if $#ranges == 1; # just take all
211
212         return $years;
213 }
214
215 search;
216 years;
217 get_results 'results' if $results;
218
219 if ( $citations ) {
220
221         citations;
222
223         do {
224                 my $part;
225                 if ( @ranges ) {
226                         $part .= $ranges[0]->[0] . '.';
227                         search;
228                         citations;
229                 }
230                 $part .= 'citing';
231                 get_results $part;
232         } while ( @ranges );
233
234 }